Replicate Concordance
JL
7/12/2017
TODO
- manual
- automatic X
- with/without QC X
- CV of reps X
- ICC ?
Total number of Control fcs files (currently) = 228
Total number of Control groups (currently) = 32
Percent of parent CV summary
| PANEL_QC | GROUP_MEDIAN_CV | GROUP_MAD_CV |
|---|---|---|
| panel1 QC FALSE | 15.81245 | 15.73181 |
| panel1 QC TRUE | 15.46096 | 15.75382 |
| panel2 QC FALSE | 20.07977 | 20.91956 |
| panel2 QC TRUE | 18.93915 | 20.55642 |
Percent of base population (lymph/PBMC) CV summary
| PANEL_QC | GROUP_MEDIAN_CV | GROUP_MAD_CV |
|---|---|---|
| panel1 QC FALSE | 23.00272 | 19.67767 |
| panel1 QC TRUE | 23.05160 | 19.76023 |
| panel2 QC FALSE | 42.44411 | 48.70975 |
| panel2 QC TRUE | 40.43178 | 48.20974 |
Replicate data clustering
